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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107392447_107396289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107392447 - 107396289

Intron Length:

3843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTGTTCTTGGCA

Flanking Amino Acid:

TQRKVVLQRKEDSADLKCQL

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

79.4

0.66

77.1

37.1

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

47.2

-0.2

3.5

73.38

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020992

107389807 - 107442721

52915

ENSAPLT00000018225

107339756 - 107442721

102966

ENSAPLT00000047143

107350656 - 107442721

92066

ENSAPLT00000008480

107339756 - 107436326

96571

ENSAPLT00000039829

107350656 - 107442721

92066

ENSAPLT00000032767

107339756 - 107442721

102966