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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107398722_107406831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107398722 - 107406831

Intron Length:

8110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCAAA

5'SS Class:

major

3'SS Sequence:

TTTACCTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTTACCTGTACA

Flanking Amino Acid:

PGDKGCFSLESVSIQELQAQ

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

74.1

38.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

78.3

0.64

0.9

72.6

37.5

Minor 5ss

34.1

-1.8

2.7

45.6

Minor BPS

61.6

0.36

1.9

77.51

38.6

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030050

107392978 - 107442721

49744

ENSAPLT00000020596

107339756 - 107442721

102966

ENSAPLT00000018225

107339756 - 107442721

102966

ENSAPLT00000008480

107339756 - 107436326

96571

ENSAPLT00000032767

107339756 - 107442721

102966