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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107406925_107410143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107406925 - 107410143

Intron Length:

3219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCATTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

GTTCCATTAAAG

Flanking Amino Acid:

QEKFTERIIQLEEEHMQTLR

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

36.9

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

69.1

0.43

1.1

68.3

36.5

Minor 5ss

35.4

-1.7

2.7

43.2

43.8

Minor BPS

0.08

1.8

64.96

41.8

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018225

107339756 - 107442721

102966

ENSAPLT00000032767

107339756 - 107442721

102966

ENSAPLT00000008480

107339756 - 107436326

96571

ENSAPLT00000030050

107392978 - 107442721

49744

ENSAPLT00000020992

107389807 - 107442721

52915

ENSAPLT00000020596

107339756 - 107442721

102966