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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107418651_107425234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107418651 - 107425234

Intron Length:

6584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGTCC

5'SS Class:

major

3'SS Sequence:

ATTTTAATGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATG

Flanking Amino Acid:

MTELKCHLEQLEGKSENTSG

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

58.4

41.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.8

0.49

1.1

67.7

Minor 5ss

42.1

-0.9

3.4

59.5

45.4

Minor BPS

69.2

0.47

1.3

71.2

36.4

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020992

107389807 - 107442721

52915

ENSAPLT00000039829

107350656 - 107442721

92066

ENSAPLT00000020596

107339756 - 107442721

102966

ENSAPLT00000036783

107339756 - 107442721

102966

ENSAPLT00000018225

107339756 - 107442721

102966

ENSAPLT00000032767

107339756 - 107442721

102966

ENSAPLT00000008480

107339756 - 107436326

96571

ENSAPLT00000030050

107392978 - 107442721

49744

ENSAPLT00000047143

107350656 - 107442721

92066