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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107432662_107433981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107432662 - 107433981

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

TGTGACTGACAT

Flanking Amino Acid:

EEETHKGNLQRAMSVSSMSE

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.7

25.4

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

-2.4

2.7

32.7

42.2

Minor BPS

44.1

-0.3

64.15

45.3

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047143

107350656 - 107442721

92066

ENSAPLT00000008480

107339756 - 107436326

96571

ENSAPLT00000030050

107392978 - 107442721

49744

ENSAPLT00000039829

107350656 - 107442721

92066

ENSAPLT00000020992

107389807 - 107442721

52915

ENSAPLT00000020596

107339756 - 107442721

102966

ENSAPLT00000036783

107339756 - 107442721

102966

ENSAPLT00000018225

107339756 - 107442721

102966

ENSAPLT00000032767

107339756 - 107442721

102966