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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107435543_107439099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107435543 - 107439099

Intron Length:

3557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTGTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACCTAC

U12 Branch Point Sequence:

CTTTCTTTCTCT

Flanking Amino Acid:

IVKVDPGSIENQTVLLTAPW

Intron Amino Acid Position:

1604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.3

40.4

Major BPS

46.9

-0.1

1.1

42.2

30.2

Major PPT

76.5

0.6

69.1

41.8

Minor 5ss

34.1

-1.8

3.2

49.3

46.5

Minor BPS

-0.3

3.6

79.06

43.7

Associated Gene:

Gene:

MTCL1

Ensembl Gene ID:

ENSAPLG00000008150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018225

107339756 - 107442721

102966