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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10748185_10749463_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10748185 - 10749463

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCAGGTAAC

5'SS Class:

major

3'SS Sequence:

GAGGTACAGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

GAGTCTTGAGGT

Flanking Amino Acid:

FITFESEADAHIRILKRVVL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.4

67.5

40.8

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

44.5

-0.3

1.2

35.4

39.6

Minor 5ss

26.5

-2.7

3.9

41.2

39.4

Minor BPS

-0.3

1.9

58.7

44.2

Associated Gene:

Gene:

LARP4B

Ensembl Gene ID:

ENSAPLG00000003813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038460

10744629 - 10749500

4872