Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_107605410_107607477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107605410 - 107607477

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTTTTCAATT

Flanking Amino Acid:

KLRLQHSIEREKLIVSNEQE

Intron Amino Acid Position:

1882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

80.8

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.8

0.49

72.6

37.3

Minor 5ss

36.6

-1.5

41.3

44.8

Minor BPS

59.4

0.37

1.5

72.41

39.3

Associated Gene:

Gene:

ANKRD12

Ensembl Gene ID:

ENSAPLG00000024129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029914

107568471 - 107612293

43823