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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107615390_107619600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107615390 - 107619600

Intron Length:

4211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

TGCGGTGTAACA

Flanking Amino Acid:

ASDVSKCLIQELCQCRPGEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

-0.5

2.3

54.83

44.6

Associated Gene:

Gene:

TWSG1

Ensembl Gene ID:

ENSAPLG00000007766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008057

107615261 - 107629264

14004