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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107665617_107666904_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107665617 - 107666904

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATTAAAA

5'SS Class:

weak_major

3'SS Sequence:

TTGTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTAAAATCACT

Flanking Amino Acid:

ADDAMSTASSTGNVPVSASL

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

62.4

37.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.1

0.72

0.9

73.5

41.8

Minor 5ss

40.3

-1.1

2.8

47.8

41.6

Minor BPS

43.5

-0.4

2.4

72.42

43.5

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007441

107665547 - 107708202

42656