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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107669560_107670584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107669560 - 107670584

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACGTGGT

5'SS Class:

major

3'SS Sequence:

TTCCGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTCTAATATTC

Flanking Amino Acid:

RNWRFRAELAEQLILLLDLY

Intron Amino Acid Position:

750

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.1

44.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.3

0.66

0.8

73.2

31.7

Minor 5ss

34.6

-1.8

3.5

44.9

44.3

Minor BPS

42.8

-0.5

1.9

56.18

35.8

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041614

107666898 - 107721163

54266

ENSAPLT00000040872

107666017 - 107721163

55147

ENSAPLT00000019693

107666017 - 107721163

55147

ENSAPLT00000007441

107665547 - 107708202

42656