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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107674282_107677615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107674282 - 107677615

Intron Length:

3334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTATTTTTAACA

Flanking Amino Acid:

IVPLIGDAVENMDSTLHYIH

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.2

0.68

0.9

76.9

35.8

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

73.5

0.73

1.2

75.26

36.4

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040872

107666017 - 107721163

55147

ENSAPLT00000019693

107666017 - 107721163

55147

ENSAPLT00000007441

107665547 - 107708202

42656

ENSAPLT00000041614

107666898 - 107721163

54266