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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107677792_107682384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107677792 - 107682384

Intron Length:

4593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

TCCTATGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTTTTCCTATGC

Flanking Amino Acid:

EPHIDDPDVKAQVEVLSAAL

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

75.1

0.57

0.9

68.8

36.8

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

-0

2.2

70.36

41.2

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041614

107666898 - 107721163

54266

ENSAPLT00000040872

107666017 - 107721163

55147

ENSAPLT00000019693

107666017 - 107721163

55147

ENSAPLT00000007441

107665547 - 107708202

42656