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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107684477_107685427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107684477 - 107685427

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

ACCCTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTTTCTTGGACC

Flanking Amino Acid:

INLISDPSRWVRQAAFQSLG

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

78.1

36.3

Major BPS

69.1

0.48

32.1

Major PPT

65.4

0.35

0.9

59.1

36.4

Minor 5ss

35.7

-1.6

42.9

43.6

Minor BPS

72.4

0.69

1.4

82.5

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041614

107666898 - 107721163

54266

ENSAPLT00000040872

107666017 - 107721163

55147

ENSAPLT00000019693

107666017 - 107721163

55147

ENSAPLT00000007441

107665547 - 107708202

42656