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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107687371_107690557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107687371 - 107690557

Intron Length:

3187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGCCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TCATTCCTAATT

Flanking Amino Acid:

VRYLADQNNQIMCKMASMVG

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

76.9

0.67

66.3

40.4

Major PPT

63.4

0.3

55.9

40.1

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

62.4

0.47

1.7

76.93

39.9

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041614

107666898 - 107721163

54266