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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107689089_107690557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107689089 - 107690557

Intron Length:

1469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

CTTGGTTTGATT

Flanking Amino Acid:

VRYLADQNNQVRKTSQAALL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

0.7

0.9

79.6

29.1

Major PPT

80.2

0.68

0.9

80.6

31.5

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

49.8

0.06

1.9

69.68

42.6

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007441

107665547 - 107708202

42656

ENSAPLT00000040872

107666017 - 107721163

55147

ENSAPLT00000019693

107666017 - 107721163

55147