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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107708190_107720637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

107708190 - 107720637

Intron Length:

12448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCGTGAG

5'SS Class:

major

3'SS Sequence:

ATGTCTCTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATTTCTGATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

59.5

41.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.36

62.1

39.3

Minor 5ss

25.1

-2.9

3.1

21.9

37.7

Minor BPS

49.8

0.07

73.59

43.1

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040872

107666017 - 107721163

55147