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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107720951_107721156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107720951 - 107721156

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TATGGGCTGATG

Flanking Amino Acid:

MADLSLLQEDLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

60.5

41.2

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

30.8

-2.2

3.3

33.7

42.2

Minor BPS

35.6

-1.2

2.5

43.39

42.8

Associated Gene:

Gene:

PPP4R1

Ensembl Gene ID:

ENSAPLG00000007154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041614

107666898 - 107721163

54266

ENSAPLT00000019693

107666017 - 107721163

55147