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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107753476_107767499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107753476 - 107767499

Intron Length:

14024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

CTTGAATTCACT

Flanking Amino Acid:

GNLALLQILQDTGVGKSSIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

40.2

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

100

1.12

0.4

100

Minor 5ss

42.2

-0.9

3.2

56.9

47.3

Minor BPS

46.1

-0.2

2.3

69.75

46.7

Associated Gene:

Gene:

RAB31

Ensembl Gene ID:

ENSAPLG00000006861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007148

107753431 - 107802530

49100