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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107864245_107866484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107864245 - 107866484

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCGTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCCTCGTTCACA

Flanking Amino Acid:

VMGGTEFVFKVNHMKVTPMD

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.4

42.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

76.9

0.61

0.8

70.9

33.3

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

49.5

-0

2.5

66.36

46.4

Associated Gene:

Gene:

APCDD1

Ensembl Gene ID:

ENSAPLG00000006589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006843

107863793 - 107880464

16672