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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107953660_107967128_F

Intron Information:

Intron Rank:

129451

Intron Class:

major

Intron Phase:

Intron Coordinates:

107953660 - 107967128

Intron Length:

13469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

AATGCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATCACAATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.9

0.36

58.8

42.1

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

46.9

-0.1

67.22

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025126

107952885 - 107967843

14959