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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108065250_108067443_F

Intron Information:

Intron Rank:
133110
Intron Class:
major
Intron Phase:
Intron Coordinates:
108065250 - 108067443
Intron Length:
2194

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGA|GTAAGTCTT
5'SS Class:
major
3'SS Sequence:
GGTCTTGTTTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATGAAT
U12 Branch Point Sequence:
TTCTCTGTAACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.4
0.65
1
75.5
40.6
Major BPS
58
0.2
1.3
67.7
36.5
Major PPT
76.5
0.6
1
72.8
42.2
Minor 5ss
41.4
-1
3.1
55.9
42.3
Minor BPS
65.4
0.48
2
78.6
38.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000021576
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024033
108064747 - 108081320
16574