About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108184114_108185564_R

Intron Information:

Intron Rank:
51
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
108184114 - 108185564
Intron Length:
1451

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATGTATC
5'SS Class:
strong_major
3'SS Sequence:
TTTTTCCCAATAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTTTTCCCAATA
Flanking Amino Acid:
LAKPIKQLLTDCRWENITVS
Intron Amino Acid Position:
2675

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.4
0.95
0.8
87
27.8
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
78.1
0.63
0.8
75.2
28.7
Minor 5ss
46.4
-0.4
2.5
62.6
42.2
Minor BPS
58.5
0.26
1.8
76.03
35.2

Associated Gene:

Gene:
PIEZO2
Ensembl Gene ID:
ENSAPLG00000013228
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013813
108182771 - 108436216
253446