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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108187649_108189522_R


Intron Information:

Intron Rank:
49

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
108187649 - 108189522

Intron Length:
1874

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATTAAT

5'SS Class:
strong_major

3'SS Sequence:
TTTACTTAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAA

U12 Branch Point Sequence:
TTTTACTTAAAC

Flanking Amino Acid:
FTVVLSWSIQRNLTLGAKAE

Intron Amino Acid Position:
2609

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.9
88.9
24.6

Major BPS
74.4
0.61
0.9
63.9
34.9

Major PPT
73.9
0.54
1
70.4
39.1

Minor 5ss
37.5
-1.4
2.8
51.2
45.3

Minor BPS
75.5
0.78
1.5
85.19
32.4

Associated Gene:

Gene:
PIEZO2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108182771 - 108436216
253446