About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108195595_108197803_R


Intron Information:

Intron Rank:
44

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
108195595 - 108197803

Intron Length:
2209

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATAAACC

5'SS Class:
major

3'SS Sequence:
TTTTCCGTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATCAT

U12 Branch Point Sequence:
TTTCCTTTATCT

Flanking Amino Acid:
MFFILPGVTERKFSQNTVAQ

Intron Amino Acid Position:
2355

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1
67.6
35.7

Major BPS
75.6
0.64
1.1
76.2
37.5

Major PPT
86
0.81
0.8
80.2
31.9

Minor 5ss
40.2
-1.1
2.9
53
43.8

Minor BPS
72.7
0.79
1.5
89.39
35

Associated Gene:

Gene:
PIEZO2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108182771 - 108436216
253446