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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108198282_108198758_R

Intron Information:

Intron Rank:
42
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
108198282 - 108198758
Intron Length:
477

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTGAGCAAA
5'SS Class:
major
3'SS Sequence:
ATTGTTGTTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
GTGTTTTTAAAT
Flanking Amino Acid:
MIKAKAFTIKKTLQVYVPIR
Intron Amino Acid Position:
2234

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.6
0.63
1
73
33.2
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
76.4
0.59
0.9
74
41
Minor 5ss
35
-1.7
2.9
39.8
40.3
Minor BPS
66.9
0.61
1.4
77.3
39.2

Associated Gene:

Gene:
PIEZO2
Ensembl Gene ID:
ENSAPLG00000013228
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013813
108182771 - 108436216
253446