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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108198892_108199628_R


Intron Information:

Intron Rank:
41

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
108198892 - 108199628

Intron Length:
737

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAATGTC

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTTTCTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTCTAT

U12 Branch Point Sequence:
TTCTCTTCTATT

Flanking Amino Acid:
SSFSSHRSKRGSTSTRNSSQ

Intron Amino Acid Position:
2190

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.5
0.88
0.9
82
29.3

Major BPS
61.5
0.29
1.3
62.1
44.1

Major PPT
91.4
0.93
0.6
91.5
19.8

Minor 5ss
36.6
-1.5
3.4
52
45.2

Minor BPS
54.6
0.22
1.9
75.69
41.5

Associated Gene:

Gene:
PIEZO2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108182771 - 108436216
253446