Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108254786_108257632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108254786 - 108257632

Intron Length:

2847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GACATCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

TCTGCTTGGACA

Flanking Amino Acid:

DSESEEEETTDLRNKWHLVI

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

69.9

0.45

0.9

62.1

39.4

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

55.7

0.17

1.6

66.47

40.4

Associated Gene:

Gene:

PIEZO2

Ensembl Gene ID:

ENSAPLG00000013228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013813

108182771 - 108436216

253446