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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108257866_108262016_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
108257866 - 108262016

Intron Length:
4151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTGGGTACC

5'SS Class:
strong_major

3'SS Sequence:
TATTTACCAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAC

U12 Branch Point Sequence:
TTACCGTTAAGT

Flanking Amino Acid:
VNGRVYLIINRLVHQDGSLP

Intron Amino Acid Position:
811

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
0.9
74.9
35.3

Major BPS
78.8
0.71
0.9
69.7
37.1

Major PPT
73.1
0.52
1
67.8
37.6

Minor 5ss
30.2
-2.3
2.9
36.9
40.4

Minor BPS
54.1
0.21
2.3
78.34
43.6

Associated Gene:

Gene:
PIEZO2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108182771 - 108436216
253446