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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108277420_108284219_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
108277420 - 108284219

Intron Length:
6800

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGTGTG

5'SS Class:
major

3'SS Sequence:
TTGTGTTGTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTCAT

U12 Branch Point Sequence:
AGACTAGTAACT

Flanking Amino Acid:
LIRLWLQEPIQIPDEEEKSD

Intron Amino Acid Position:
351

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1.1
70.9
39.3

Major BPS
72.5
0.56
1.2
75
39.9

Major PPT
74.3
0.55
1
73.5
41.9

Minor 5ss
38.9
-1.3
3.4
55.1
43.4

Minor BPS
44.8
-0.3
2.1
62.73
40.6

Associated Gene:

Gene:
PIEZO2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108182771 - 108436216
253446