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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10828857_10829521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10828857 - 10829521

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

TATTTGATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTATTTGATT

Flanking Amino Acid:

KKITVVPSAKDFIDLTLSKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.6

0.69

0.9

74.3

39.8

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

66.4

0.6

1.4

81.94

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014423

10828809 - 10838800

9992