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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108349747_108380276_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
108349747 - 108380276
Intron Length:
30530

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACT|GTGAGTAAA
5'SS Class:
major
3'SS Sequence:
CCTCTTTGTATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTTAC
U12 Branch Point Sequence:
TCTTTACTGAGG
Flanking Amino Acid:
ARKTIEPGFNCSTWEKTLRQ
Intron Amino Acid Position:
86

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.3
0.53
1.1
72.6
33.5
Major BPS
74
0.6
1
65.6
41.1
Major PPT
75.5
0.57
0.9
71.5
33
Minor 5ss
32.5
-2
2.8
43.1
43.9
Minor BPS
42.4
-0.7
2.1
51.69
43

Associated Gene:

Gene:
PIEZO2
Ensembl Gene ID:
ENSAPLG00000013228
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013813
108182771 - 108436216
253446