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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10840706_10842210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

10840706 - 10842210

Intron Length:

1505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGACAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

CTGACCTAAAAC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

56.6

38.1

Major BPS

63.9

0.35

63.9

30.3

Major PPT

1.1

0.4

13.8

Minor 5ss

24.6

-2.9

3.1

38.1

Minor BPS

49.8

-0

1.9

60.1

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019152

10840705 - 10846223

5519