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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10842468_10843411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10842468 - 10843411

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGGTTCTGACGT

Flanking Amino Acid:

KAELGIPMEQVTPEEILYLT

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

71.4

0.48

65.2

41.2

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

46.5

-0.1

64.76

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014184

10841987 - 10845765

3779

ENSAPLT00000019152

10840705 - 10846223

5519