Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_108642909_108644062_R

Intron Information:

Intron Rank:

153752

Intron Class:

major

Intron Phase:

Intron Coordinates:

108642909 - 108644062

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

ATACTATGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATCTCATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

64.2

0.32

57.9

41.5

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

55.7

0.17

1.6

65.4

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040333

108637540 - 108644690

7151