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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108843068_108887967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108843068 - 108887967

Intron Length:

44900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATATCT

Flanking Amino Acid:

NEYQLIDCAQYFLERIDSVS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

89.5

0.89

0.6

81.6

30.4

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

58.9

0.36

2.1

86.36

39.1

Associated Gene:

Gene:

GNAL

Ensembl Gene ID:

ENSAPLG00000012611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013181

108706884 - 108898372

191489