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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108888023_108890191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108888023 - 108890191

Intron Length:

2169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATGTCACTAATC

Flanking Amino Acid:

SMDDYTPTDQDLLRCRVLTS

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

1.1

82.6

29.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

85.3

0.79

0.8

77.2

Minor 5ss

32.6

-2

3.1

41.2

45.2

Minor BPS

52.6

0.06

1.9

66.9

38.5

Associated Gene:

Gene:

GNAL

Ensembl Gene ID:

ENSAPLG00000012611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013181

108706884 - 108898372

191489