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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108901981_108903419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108901981 - 108903419

Intron Length:

1439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTAACAGCAAAG

Flanking Amino Acid:

RNRNNPSFIMGSITPTDFSL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

62.2

0.3

1.2

38.7

Major PPT

88.5

0.87

0.7

80.8

36.8

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

36.2

-1.1

2.2

41.27

41.9

Associated Gene:

Gene:

MPPE1

Ensembl Gene ID:

ENSAPLG00000012473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013004

108901125 - 108910026

8902