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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108907575_108908398_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
108907575 - 108908398

Intron Length:
824

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTCCT

5'SS Class:
major

3'SS Sequence:
TCCTGTCACACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAC

U12 Branch Point Sequence:
AATTTCTTACCT

Flanking Amino Acid:
VGNHDIGFHYEMTTYKVKRF

Intron Amino Acid Position:
163

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.1
69.1
41.8

Major BPS
81.5
0.78
0.9
71.6
36.1

Major PPT
70.3
0.46
0.9
64.5
35.7

Minor 5ss
38.1
-1.3
3
48.4
41.1

Minor BPS
69.9
0.7
1.6
83.19
37.7

Associated Gene:

Gene:
MPPE1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108901125 - 108910026
8902