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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108970785_108972790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108970785 - 108972790

Intron Length:

2006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTAAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTAAATT

Flanking Amino Acid:

VLQKGQKWTQTRNGVVPAKQ

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.1

0.48

72.3

36.8

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

63.3

0.5

1.6

78.3

39.3

Associated Gene:

Gene:

CIDEA

Ensembl Gene ID:

ENSAPLG00000011917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012404

108966929 - 108976133

9205