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Intron Name: Anas_platyrhynchos_platyrhynchos_2_108972973_108975997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108972973 - 108975997

Intron Length:

3025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTAAACA

Flanking Amino Acid:

IKCMAAKNVLRKVLQLMSHA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

82.1

37.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

39.8

-1.1

2.8

52.3

44.3

Minor BPS

66.5

0.51

1.6

76.76

34.5

Associated Gene:

Gene:

CIDEA

Ensembl Gene ID:

ENSAPLG00000011917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012404

108966929 - 108976133

9205