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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109008806_109009818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109008806 - 109009818

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGATCGGTAATT

Flanking Amino Acid:

KLASLTPGFSGADIANVCNE

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

79.1

0.65

0.8

77.2

31.6

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

-0

2.6

73.32

43.8

Associated Gene:

Gene:

AFG3L2

Ensembl Gene ID:

ENSAPLG00000011183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011680

109003371 - 109027121

23751