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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109009945_109010068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109009945 - 109010068

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATGTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATTTCTTTAATG

Flanking Amino Acid:

PGRFDRQIYIGPPDIKGRAS

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

67.9

0.4

1.2

67.2

42.6

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

79.3

0.78

1.1

77.48

33.7

Associated Gene:

Gene:

AFG3L2

Ensembl Gene ID:

ENSAPLG00000011183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011680

109003371 - 109027121

23751