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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109027390_109028973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109027390 - 109028973

Intron Length:

1584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

ATAGTTACAAAT

Flanking Amino Acid:

MKIWSSEHVFGHPWDTVIKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

69.5

0.48

73.5

28.6

Major PPT

90.9

0.92

0.6

83.9

31.1

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

41.9

-0.5

1.8

57.31

39.1

Associated Gene:

Gene:

PRELID3A

Ensembl Gene ID:

ENSAPLG00000010888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011342

109027358 - 109035625

8268