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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109046702_109046976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109046702 - 109046976

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTTCTTATGC

Flanking Amino Acid:

TWSYTCQFCKRPVCSQCCKK

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.6

0.87

0.8

85.2

28.2

Minor 5ss

-1

59.7

44.8

Minor BPS

58.9

0.26

1.9

72.01

39.4

Associated Gene:

Gene:

SPIRE1

Ensembl Gene ID:

ENSAPLG00000010595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039881

109045334 - 109167550

122217

ENSAPLT00000011033

109045334 - 109167550

122217