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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109047048_109048966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109047048 - 109048966

Intron Length:

1919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTTTGTCTAACA

Flanking Amino Acid:

DVYTALKKGKLCFCCRTRRF

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.3

0.71

0.8

73.8

36.9

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

60.6

0.33

2.1

79.78

36.5

Associated Gene:

Gene:

SPIRE1

Ensembl Gene ID:

ENSAPLG00000010595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039881

109045334 - 109167550

122217

ENSAPLT00000011033

109045334 - 109167550

122217