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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109071460_109077436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109071460 - 109077436

Intron Length:

5977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

AATGCAAGACAT

Flanking Amino Acid:

SKRYTLRKVMVNGDIPPRLK

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

69.1

0.47

1.2

34.1

Major PPT

89.9

0.9

0.6

88.2

21.5

Minor 5ss

33.7

-1.9

2.9

Minor BPS

35.9

-0.9

52.44

41.3

Associated Gene:

Gene:

SPIRE1

Ensembl Gene ID:

ENSAPLG00000010595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039881

109045334 - 109167550

122217

ENSAPLT00000011033

109045334 - 109167550

122217