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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109157035_109167207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109157035 - 109167207

Intron Length:

10173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

EPRRPPHSAEDKSDRLHCTE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

65.4

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.1

0.97

0.7

88.7

26.7

Minor 5ss

29.1

-2.4

3.5

32.5

42.6

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

SPIRE1

Ensembl Gene ID:

ENSAPLG00000010595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039881

109045334 - 109167550

122217

ENSAPLT00000011033

109045334 - 109167550

122217