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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109177487_109179205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109177487 - 109179205

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTCGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTAAAGGAACT

Flanking Amino Acid:

TNIAVELLGVGSESKVSVGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

70.3

0.46

1.1

71.2

38.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

43.6

-0.4

2.4

72.4

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010630

109168508 - 109181974

13467