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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109206051_109207623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109206051 - 109207623

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ACCTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTCAATATAACC

Flanking Amino Acid:

FSLVDTCLVLMEKKDPFSVD

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

76.9

0.67

1.2

31.9

Major PPT

82.1

0.72

0.8

75.8

32.1

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

49.7

-0

1.8

65.02

40.3

Associated Gene:

Gene:

PTPN2

Ensembl Gene ID:

ENSAPLG00000009603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010045

109196483 - 109227485

31003